Data-driven methods for imputing national-level incidence in global burden of disease studies.

Objective To develop transparent and reproducible methods for imputing missing data on disease incidence at national-level for the year 2005. Methods We compared several models for imputing missing country-level incidence rates for two foodborne diseases - congenital toxoplasmosis and aflatoxin-rela...

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Publicado en:Bulletin of the World Health Organization Vol. 93; no. 4; pp. 228 - 237
Autores principales: McDonald, Scott A., Devleesschauwer, Brecht, Speybroeck, Niko, Hens, Niel, Praet, Nicolas, Torgerson, Paul R., Havelaar, Arie H., Wu, Felicia, Tremblay, Marlène, W Amene, Ermias, Döpfer, Dörte
Formato: research tables/charts Journal Article
Publicado: World Health Organization Apr2015
Acceso en línea:Ver este registro en EBSCOhost
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        atl: Data-driven methods for imputing national-level incidence in global burden of disease studies.
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        au:
          McDonald, Scott A.
          Devleesschauwer, Brecht
          Speybroeck, Niko
          Hens, Niel
          Praet, Nicolas
          Torgerson, Paul R.
          Havelaar, Arie H.
          Wu, Felicia
          Tremblay, Marlène
          W Amene, Ermias
          Döpfer, Dörte
        affil: Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM), Bilthoven, Netherlands
      sug:
        subj:
          Research Methodology
          Research Measurement Methods
          Data Analysis, Statistical Methods
          Disease Surveillance
          Incidence
          Comparative Studies
          Confidence Intervals
          Regression
          Funding Source
      ab: Objective To develop transparent and reproducible methods for imputing missing data on disease incidence at national-level for the year 2005. Methods We compared several models for imputing missing country-level incidence rates for two foodborne diseases - congenital toxoplasmosis and aflatoxin-related hepatocellular carcinoma. Missing values were assumed to be missing at random. Predictor variables were selected using least absolute shrinkage and selection operator regression. We compared the predictive performance of naive extrapolation approaches and Bayesian random and mixed-effects regression models. Leave-one-out cross-validation was used to evaluate model accuracy. Findings The predictive accuracy of the Bayesian mixed-effects models was significantly better than that of the naive extrapolation method for one of the two disease models. However, Bayesian mixed-effects models produced wider prediction intervals for both data sets. Conclusion Several approaches are available for imputing missing data at national level. Strengths of a hierarchical regression approach for this type of task are the ability to derive estimates from other similar countries, transparency, computational efficiency and ease of interpretation. The inclusion of informative covariates may improve model performance, but results should be appraised carefully.
      pubtype: Academic Journal
      doctype:
        research
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      ougenre: Article
    language: English
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