Expansion of urease- and uricase-containing, indole- and p-cresol-forming and contraction of short-chain fatty acid-producing intestinal microbiota in ESRD.

Background: Intestinal microbiome constitutes a symbiotic ecosystem that is essential for health, and changes in its composition/function cause various illnesses. Biochemical milieu shapes the structure and function of the microbiome. Recently, we found marked differences in the abundance of numerou...

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Publicado en:American Journal of Nephrology Vol. 39; no. 2; pp. 230 - 238
Autores principales: Wong, Jakk, Piceno, Yvette M, Desantis, Todd Z, Pahl, Madeleine, Andersen, Gary L, Vaziri, Nosratola D
Formato: research Journal Article
Publicado: Karger AG Mar2014
Acceso en línea:Ver este registro en EBSCOhost
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      dt: Mar2014
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      pub: Karger AG
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        atl: Expansion of urease- and uricase-containing, indole- and p-cresol-forming and contraction of short-chain fatty acid-producing intestinal microbiota in ESRD.
      aug:
        au:
          Wong, Jakk
          Piceno, Yvette M
          Desantis, Todd Z
          Pahl, Madeleine
          Andersen, Gary L
          Vaziri, Nosratola D
        affil: Center for Environmental Biotechnology, Lawrence Berkeley National Laboratory, Berkeley, Calif., USA.
      sug:
        subj:
          Phenols
          Fatty Acids, Volatile
          Indoles
          Kidney Failure, Chronic Metabolism
          Oxidoreductases
          Urease
          Microbiota
          Adult
          Aged
          Ammonia
          Diet
          Female
          Human
          Inflammation
          Intestines Microbiology
          Kidney Failure, Chronic Microbiology
          Male
          Microbiologic Phenomena
          Middle Age
          Sulfuric Acids
          Urea
          Adult: 19-44 years
          Aged: 65+ years
          Middle Aged: 45-64 years
          Female
          Male
      ab: Background: Intestinal microbiome constitutes a symbiotic ecosystem that is essential for health, and changes in its composition/function cause various illnesses. Biochemical milieu shapes the structure and function of the microbiome. Recently, we found marked differences in the abundance of numerous bacterial taxa between ESRD and healthy individuals. Influx of urea and uric acid and dietary restriction of fruits and vegetables to prevent hyperkalemia alter ESRD patients' intestinal milieu. We hypothesized that relative abundances of bacteria possessing urease, uricase, and p-cresol- and indole-producing enzymes is increased, while abundance of bacteria containing enzymes converting dietary fiber to short-chain fatty acids (SCFA) is reduced in ESRD.Methods: Reference sets of bacteria containing genes of interest were compiled to family, and sets of intestinal bacterial families showing differential abundances between 12 healthy and 24 ESRD individuals enrolled in our original study were compiled. Overlap between sets was assessed using hypergeometric distribution tests.Results: Among 19 microbial families that were dominant in ESRD patients, 12 possessed urease, 5 possessed uricase, and 4 possessed indole and p-cresol-forming enzymes. Among 4 microbial families that were diminished in ESRD patients, 2 possessed butyrate-forming enzymes. Probabilities of these overlapping distributions were <0.05.Conclusions: ESRD patients exhibited significant expansion of bacterial families possessing urease, uricase, and indole and p-cresol forming enzymes, and contraction of families possessing butyrate-forming enzymes. Given the deleterious effects of indoxyl sulfate, p-cresol sulfate, and urea-derived ammonia, and beneficial actions of SCFA, these changes in intestinal microbial metabolism contribute to uremic toxicity and inflammation.
      pubtype: Academic Journal
      doctype:
        research
        Journal Article
      ougenre: Article
    language: English
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