A k-mer-based barcode DNA classification methodology based on spectral representation and a neural gas network.

Objectives: In this paper, an alignment-free method for DNA barcode classification that is based on both a spectral representation and a neural gas network for unsupervised clustering is proposed.Methods: In the proposed methodology, distinctive words are identified from a spectral representation of...

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Bibliographic Details
Published in:Artificial Intelligence in Medicine Vol. 64; no. 3; pp. 173 - 185
Main Authors: Fiannaca, Antonino, La Rosa, Massimo, Rizzo, Riccardo, Urso, Alfonso
Format: research Journal Article
Published: Elsevier B.V. Jul2015
Online Access:View this record in EBSCOhost