Robust Skull-Stripping Segmentation Based on Irrational Mask for Magnetic Resonance Brain Images.

This paper proposes a new method for simple, efficient, and robust removal of the non-brain tissues in MR images based on an irrational mask for filtration within a binary morphological operation framework. The proposed skull-stripping segmentation is based on two irrational 3 × 3 and 5 × 5 masks, h...

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Publicado en:Journal of Digital Imaging Vol. 28; no. 6; pp. 738 - 748
Autores principales: Moldovanu, Simona, Moraru, Luminița, Biswas, Anjan
Formato: algorithm diagnostic images research tables/charts Journal Article
Publicado: Springer Nature Dec2015
Acceso en línea:Ver este registro en EBSCOhost
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      dt: Dec2015
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      pub: Springer Nature
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        10.1007/s10278-015-9776-6
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        atl: Robust Skull-Stripping Segmentation Based on Irrational Mask for Magnetic Resonance Brain Images.
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          Moldovanu, Simona
          Moraru, Luminița
          Biswas, Anjan
        affil: Department of Chemistry, Physics and Environment, Faculty of Sciences and Environment, Dunărea de Jos University of Galaţi, 47 Domnească St. 800008 Galaţi Romania
      sug:
        subj:
          Magnetic Resonance Imaging
          Skull Anatomy and Histology
          Image Processing, Computer Assisted Methods
          Brain Anatomy and Histology
          Prospective Studies
          kappa Statistic
          Algorithms Evaluation
          Validation Studies
          Sensitivity and Specificity
          Adult
          Middle Age
          Aged
          Aged, 80 and Over
          Female
          Male
          Human
          Funding Source
          Adult: 19-44 years
          Middle Aged: 45-64 years
          Aged: 65+ years
          Aged, 80 & over
          Female
          Male
      ab: This paper proposes a new method for simple, efficient, and robust removal of the non-brain tissues in MR images based on an irrational mask for filtration within a binary morphological operation framework. The proposed skull-stripping segmentation is based on two irrational 3 × 3 and 5 × 5 masks, having the sum of its weights equal to the transcendental number π value provided by the Gregory-Leibniz infinite series. It allows maintaining a lower rate of useful pixel loss. The proposed method has been tested in two ways. First, it has been validated as a binary method by comparing and contrasting with Otsu's, Sauvola's, Niblack's, and Bernsen's binary methods. Secondly, its accuracy has been verified against three state-of-the-art skull-stripping methods: the graph cuts method, the method based on Chan-Vese active contour model, and the simplex mesh and histogram analysis skull stripping. The performance of the proposed method has been assessed using the Dice scores, overlap and extra fractions, and sensitivity and specificity as statistical methods. The gold standard has been provided by two neurologist experts. The proposed method has been tested and validated on 26 image series which contain 216 images from two publicly available databases: the Whole Brain Atlas and the Internet Brain Segmentation Repository that include a highly variable sample population (with reference to age, sex, healthy/diseased). The approach performs accurately on both standardized databases. The main advantage of the proposed method is its robustness and speed.
      pubtype: Academic Journal
      doctype:
        algorithm
        diagnostic images
        research
        tables/charts
        Journal Article
      ougenre: Article
    language: English
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