Flexibility Coexists with Shape-Persistence in Cyanostar Macrocycles.

Shape-persistent macrocycles are attractive functional targets for synthesis, molecular recognition, and hierarchical self-assembly. Such macrocycles are noncollapsible and geometrically well-defined, and they are traditionally characterized by having repeat units and low conformational flexibility....

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Publicado en:Journal of the American Chemical Society Vol. 138; no. 14; pp. 4843 - 4852
Autores principales: Yun Liu, Singharoy, Abhishek, Mayne, Christopher G., Sengupta, Arkajyoti, Raghavachari, Krishnan, Schulten, Klaus, Flood, Amar H.
Formato: Artículo
Publicado: American Chemical Society 4/13/2016
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Acceso en línea:Ver este registro en EBSCOhost
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      dt: 4/13/2016
      vid: 138
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      pub: American Chemical Society
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        115260683
        10.1021/jacs.6b00712
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        atl: Flexibility Coexists with Shape-Persistence in Cyanostar Macrocycles.
      aug:
        au:
          Yun Liu
          Singharoy, Abhishek
          Mayne, Christopher G.
          Sengupta, Arkajyoti
          Raghavachari, Krishnan
          Schulten, Klaus
          Flood, Amar H.
        affil:
          Department of Chemistry, Indiana University, 800 East Kirkwood Avenue, Bloomington, Indiana 47405, United States
          Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, 405 North Mathews Avenue, Urbana, Illinois 61801, United States
          Department of Physics, University of Illinois at Urbana-Champaign, 1110 West Green Street, Urbana, Illinois 61801, United States
      su:
        Macrocyclic compounds
        Chemical synthesis
        Molecular dynamics
        Density functional theory
        Conformers (Chemistry)
      sug:
        subj:
          Macrocyclic compounds
          Chemical synthesis
          Molecular dynamics
          Density functional theory
          Conformers (Chemistry)
      ab: Shape-persistent macrocycles are attractive functional targets for synthesis, molecular recognition, and hierarchical self-assembly. Such macrocycles are noncollapsible and geometrically well-defined, and they are traditionally characterized by having repeat units and low conformational flexibility. Here, we find it necessary to refine these ideas in the face of highly flexible yet shape-persistent macrocycles. A molecule is shape-persistent if it has a small change in shape when perturbed by external stimuli (e.g., heat, light, and redox chemistry). In support of this idea, we provide the first examination of the relationships between a macrocycle's shape persistence, its conformational space, and the resulting functions. We do this with a star-shaped macrocycle called cyanostar that is flexible as well as being shape-persistent. We employed molecular dynamics (MD), density functional theory (DFT), and NMR experiments. Considering a thermal bath as a stimulus, we found a single macrocycle has 332 accessible conformers with olefins undergoing rapid interconversion by up-down and in-out motions on short time scales (0.2 ns). These many interconverting conformations classify single cyanostars as flexible. To determine and confirm that cyanostars are shape-persistent, we show that they have a high 87% shape similarity across these conformations. To further test the idea, we use the binding of diglyme to the single macrocycle as guest-induced stimulation. This guest has almost no effect on the conformational space. However, formation of a 2:1 sandwich complex involving two macrocycles enhances rigidity and dramatically shifts the conformer distribution toward perfect bowls. Overall, the present study expands the scope of shape-persistent macrocycles to include flexible macrocycles if, and only if, their conformers have similar shapes.
      pubtype: Academic Journal
      doctype: Article
      src: R
    language: English
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