Semisupervised Learning Based Disease-Symptom and Symptom-Therapeutic Substance Relation Extraction from Biomedical Literature.

With the rapid growth of biomedical literature, a large amount of knowledge about diseases, symptoms, and therapeutic substances hidden in the literature can be used for drug discovery and disease therapy. In this paper, we present a method of constructing two models for extracting the relations bet...

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Publicado en:BioMed Research International Vol. 2016; pp. 1 - 14
Autores principales: Feng, Qinlin, Gui, Yingyi, Yang, Zhihao, Wang, Lei, Li, Yuxia
Formato: equations & formulas research tables/charts Journal Article
Publicado: Wiley-Blackwell 10/16/2016
Acceso en línea:Ver este registro en EBSCOhost
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      dt: 10/16/2016
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      pub: Wiley-Blackwell
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        10.1155/2016/3594937
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        atl: Semisupervised Learning Based Disease-Symptom and Symptom-Therapeutic Substance Relation Extraction from Biomedical Literature.
      aug:
        au:
          Feng, Qinlin
          Gui, Yingyi
          Yang, Zhihao
          Wang, Lei
          Li, Yuxia
        affil: College of Computer Science and Technology, Dalian University of Technology, Dalian 116024, China
      sug:
        subj:
          Disease Symptoms
          Disease Therapy
          Drug Discovery
          Medical Literature
          Algorithms
          Information Retrieval
          ROC Curve
          Precision
          Descriptive Statistics
          kappa Statistic
          Funding Source
      ab: With the rapid growth of biomedical literature, a large amount of knowledge about diseases, symptoms, and therapeutic substances hidden in the literature can be used for drug discovery and disease therapy. In this paper, we present a method of constructing two models for extracting the relations between the disease and symptom and symptom and therapeutic substance from biomedical texts, respectively. The former judges whether a disease causes a certain physiological phenomenon while the latter determines whether a substance relieves or eliminates a certain physiological phenomenon. These two kinds of relations can be further utilized to extract the relations between disease and therapeutic substance. In our method, first two training sets for extracting the relations between the disease-symptom and symptom-therapeutic substance are manually annotated and then two semisupervised learning algorithms, that is, Co-Training and Tri-Training, are applied to utilize the unlabeled data to boost the relation extraction performance. Experimental results show that exploiting the unlabeled data with both Co-Training and Tri-Training algorithms can enhance the performance effectively.
      pubtype: Academic Journal
      doctype:
        equations & formulas
        research
        tables/charts
        Journal Article
      ougenre: Article
    language: English
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