Fuzzy Expert System based on a Novel Hybrid Stem Cell (HSC) Algorithm for Classification of Micro Array Data.

In the growing scenario, microarray data is extensively used since it provides a more comprehensive understanding of genetic variants among diseases. As the gene expression samples have high dimensionality it becomes tedious to analyze the samples manually. Hence an automated system is needed to ana...

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Published in:Journal of Medical Systems Vol. 42; no. 4; pp. 1 - 2
Main Authors: Vijay, S. Arul Antran, GaneshKumar, P.
Format: research Journal Article
Published: Springer Nature Apr2018
Online Access:View this record in EBSCOhost
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      dt: Apr2018
      vid: 42
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      pub: Springer Nature
      place: New York, New York
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        10.1007/s10916-018-0910-0
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        atl: Fuzzy Expert System based on a Novel Hybrid Stem Cell (HSC) Algorithm for Classification of Micro Array Data.
      aug:
        au:
          Vijay, S. Arul Antran
          GaneshKumar, P.
        affil: Department of Computer Science and Engineering, Karpagam College of Engineering, Coimbatore, India
      sug:
        subj:
          Artificial Intelligence
          Algorithms
          Microarray Analysis
          Oligonucleotide Array Sequence Analysis
          Automation
          Simulations
          Gene Expression Classification
          Hereditary Diseases Diagnosis
          Hereditary Diseases Prevention and Control
          Diabetes Mellitus, Type 2 Familial and Genetic
          Insulin Sensitivity Familial and Genetic
          Insulin Resistance Familial and Genetic
          Colonic Neoplasms Familial and Genetic
          Prostatic Neoplasms Familial and Genetic
          Validity
          Human
      ab: In the growing scenario, microarray data is extensively used since it provides a more comprehensive understanding of genetic variants among diseases. As the gene expression samples have high dimensionality it becomes tedious to analyze the samples manually. Hence an automated system is needed to analyze these samples. The fuzzy expert system offers a clear classification when compared to the machine learning and statistical methodologies. In fuzzy classification, knowledge acquisition would be a major concern. Despite several existing approaches for knowledge acquisition much effort is necessary to enhance the learning process. This paper proposes an innovative Hybrid Stem Cell (HSC) algorithm that utilizes Ant Colony optimization and Stem Cell algorithm for designing fuzzy classification system to extract the informative rules to form the membership functions from the microarray dataset. The HSC algorithm uses a novel Adaptive Stem Cell Optimization (ASCO) to improve the points of membership function and Ant Colony Optimization to produce the near optimum rule set. In order to extract the most informative genes from the large microarray dataset a method called Mutual Information is used. The performance results of the proposed technique evaluated using the five microarray datasets are simulated. These results prove that the proposed Hybrid Stem Cell (HSC) algorithm produces a precise fuzzy system than the existing methodologies.
      pubtype: Academic Journal
      doctype:
        research
        Journal Article
      ougenre: Article
    language: English
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