A Comparison of the Efficiency of Using a Deep CNN Approach with Other Common Regression Methods for the Prediction of EGFR Expression in Glioblastoma Patients.

To estimate epithermal growth factor receptor (EGFR) expression level in glioblastoma (GBM) patients using radiogenomic analysis of magnetic resonance images (MRI). A comparative study using a deep convolutional neural network (CNN)–based regression, deep neural network, least absolute shrinkage and...

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Publicado en:Journal of Digital Imaging Vol. 33; no. 2; pp. 391 - 399
Autores principales: Hedyehzadeh, Mohammadreza, Maghooli, Keivan, MomenGharibvand, Mohammad, Pistorius, Stephen
Formato: diagnostic images equations & formulas research tables/charts Journal Article
Publicado: Springer Nature Apr2020
Acceso en línea:Ver este registro en EBSCOhost
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      dt: Apr2020
      vid: 33
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      pub: Springer Nature
      place: New York, New York
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        10.1007/s10278-019-00290-4
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        atl: A Comparison of the Efficiency of Using a Deep CNN Approach with Other Common Regression Methods for the Prediction of EGFR Expression in Glioblastoma Patients.
      aug:
        au:
          Hedyehzadeh, Mohammadreza
          Maghooli, Keivan
          MomenGharibvand, Mohammad
          Pistorius, Stephen
        affil: Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
      sug:
        subj:
          Deep Learning
          Neural Networks (Computer)
          Epidermal Growth Factors Blood
          Receptors, Cell Surface Blood
          Gene Expression Evaluation
          Glioma Diagnosis
          Magnetic Resonance Imaging Methods
          Human
          Comparative Studies
          Linear Regression
      ab: To estimate epithermal growth factor receptor (EGFR) expression level in glioblastoma (GBM) patients using radiogenomic analysis of magnetic resonance images (MRI). A comparative study using a deep convolutional neural network (CNN)–based regression, deep neural network, least absolute shrinkage and selection operator (LASSO) regression, elastic net regression, and linear regression with no regularization was carried out to estimate EGFR expression of 166 GBM patients. Except for the deep CNN case, overfitting was prevented by using feature selection, and loss values for each method were compared. The loss values in the training phase for deep CNN, deep neural network, Elastic net, LASSO, and the linear regression with no regularization were 2.90, 8.69, 7.13, 14.63, and 21.76, respectively, while in the test phase, the loss values were 5.94, 10.28, 13.61, 17.32, and 24.19 respectively. These results illustrate that the efficiency of the deep CNN approach is better than that of the other methods, including Lasso regression, which is a regression method known for its advantage in high-dimension cases. A comparison between deep CNN, deep neural network, and three other common regression methods was carried out, and the efficiency of the CNN deep learning approach, in comparison with other regression models, was demonstrated.
      pubtype: Academic Journal
      doctype:
        diagnostic images
        equations & formulas
        research
        tables/charts
        Journal Article
      ougenre: Article
    language: English
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