MR Denoising Increases Radiomic Biomarker Precision and Reproducibility in Oncologic Imaging.

Several noise sources, such as the Johnson–Nyquist noise, affect MR images disturbing the visualization of structures and affecting the subsequent extraction of radiomic data. We evaluate the performance of 5 denoising filters (anisotropic diffusion filter (ADF), curvature flow filter (CFF), Gaussia...

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Publicado en:Journal of Digital Imaging Vol. 34; no. 5; pp. 1134 - 1146
Autores principales: Fernández Patón, Matías, Cerdá Alberich, Leonor, Sangüesa Nebot, Cinta, Martínez de las Heras, Blanca, Veiga Canuto, Diana, Cañete Nieto, Adela, Martí-Bonmatí, Luis
Formato: diagnostic images equations & formulas pictorial research tables/charts Journal Article
Publicado: Springer Nature Oct2021
Acceso en línea:Ver este registro en EBSCOhost
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      dt: Oct2021
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      pub: Springer Nature
      place: New York, New York
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        10.1007/s10278-021-00512-8
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        atl: MR Denoising Increases Radiomic Biomarker Precision and Reproducibility in Oncologic Imaging.
      aug:
        au:
          Fernández Patón, Matías
          Cerdá Alberich, Leonor
          Sangüesa Nebot, Cinta
          Martínez de las Heras, Blanca
          Veiga Canuto, Diana
          Cañete Nieto, Adela
          Martí-Bonmatí, Luis
        affil: Grupo de Investigación Biomédica en Imagen, Instituto de Investigación Sanitaria La Fe, Avenida Fernando Abril Martorell, 106 Torre A 7planta, 46026, Valencia, Spain
      sug:
        subj:
          Magnetic Resonance Imaging Methods
          Tumor Markers, Biological
          Precision
          Reproducibility of Results
          Oncologic Care
          Diagnostic Imaging
          Human
          Image Processing, Computer Assisted
          Noise Adverse Effects
          Product Evaluation
          Phantoms, Imaging
          Neuroblastoma
          Cancer Patients
      ab: Several noise sources, such as the Johnson–Nyquist noise, affect MR images disturbing the visualization of structures and affecting the subsequent extraction of radiomic data. We evaluate the performance of 5 denoising filters (anisotropic diffusion filter (ADF), curvature flow filter (CFF), Gaussian filter (GF), non-local means filter (NLMF), and unbiased non-local means (UNLMF)), with 33 different settings, in T2-weighted MR images of phantoms (N = 112) and neuroblastoma patients (N = 25). Filters were discarded until the most optimal solutions were obtained according to 3 image quality metrics: peak signal-to-noise ratio (PSNR), edge-strength similarity–based image quality metric (ESSIM), and noise (standard deviation of the signal intensity of a region in the background area). The selected filters were ADFs and UNLMs. From them, 107 radiomics features preservation at 4 progressively added noise levels were studied. The ADF with a conductance of 1 and 2 iterations standardized the radiomic features, improving reproducibility and quality metrics.
      pubtype: Academic Journal
      doctype:
        diagnostic images
        equations & formulas
        pictorial
        research
        tables/charts
        Journal Article
      ougenre: Article
    language: English
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