Prediction of Neurodevelopmental Disorders Based on De Novo Coding Variation.

The early detection of neurodevelopmental disorders (NDDs) can significantly improve patient outcomes. The differential burden of non-synonymous de novo mutation among NDD cases and controls indicates that de novo coding variation can be used to identify a subset of samples that will likely display...

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Publicado en:Journal of Autism & Developmental Disorders Vol. 53; no. 3; pp. 963 - 977
Autores principales: Chow, Julie C., Hormozdiari, Fereydoun
Formato: research tables/charts Journal Article
Publicado: Springer Nature Mar2023
Acceso en línea:Ver este registro en EBSCOhost
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      dt: Mar2023
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      pub: Springer Nature
      place: New York, New York
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        10.1007/s10803-022-05586-z
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        atl: Prediction of Neurodevelopmental Disorders Based on De Novo Coding Variation.
      aug:
        au:
          Chow, Julie C.
          Hormozdiari, Fereydoun
        affil: UC Davis Genome Center, University of California, 95616, Davis, CA, USA
      sug:
        subj:
          Mental Disorders Diagnosed in Childhood
          Mutation
          Early Diagnosis
          Genes
          Human
          Outcomes (Health Care)
          Phenotype
          Prediction Models
          Funding Source
      ab: The early detection of neurodevelopmental disorders (NDDs) can significantly improve patient outcomes. The differential burden of non-synonymous de novo mutation among NDD cases and controls indicates that de novo coding variation can be used to identify a subset of samples that will likely display an NDD phenotype. Thus, we have developed an approach for the accurate prediction of NDDs with very low false positive rate (FPR) using de novo coding variation for a small subset of cases. We use a shallow neural network that integrates de novo likely gene-disruptive and missense variants, measures of gene constraint, and conservation information to predict a small subset of NDD cases at very low FPR and prioritizes NDD risk genes for future clinical study.
      pubtype: Academic Journal
      doctype:
        research
        tables/charts
        Journal Article
      ougenre: Article
    language: English
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