An Artificial Intelligent System for Prostate Cancer Diagnosis in Whole Slide Images.

In recent years a significant demand to develop computer-assisted diagnostic tools to assess prostate cancer using whole slide images has been observed. In this study we develop and validate a machine learning system for cancer assessment, inclusive of detection of perineural invasion and measuremen...

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Publicado en:Journal of Medical Systems Vol. 48; no. 1; pp. 1 - 17
Autores principales: Saha, Sajib, Vignarajan, Janardhan, Flesch, Adam, Jelinko, Patrik, Gorog, Petra, Szep, Eniko, Toth, Csaba, Gombas, Peter, Schvarcz, Tibor, Mihaly, Orsolya, Kapin, Marianna, Zub, Alexandra, Kuthi, Levente, Tiszlavicz, Laszlo, Glasz, Tibor, Frost, Shaun
Formato: equations & formulas pictorial research tables/charts Journal Article
Publicado: Springer Nature 10/28/2024
Acceso en línea:Ver este registro en EBSCOhost
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      pub: Springer Nature
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        10.1007/s10916-024-02118-3
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          Saha, Sajib
          Vignarajan, Janardhan
          Flesch, Adam
          Jelinko, Patrik
          Gorog, Petra
          Szep, Eniko
          Toth, Csaba
          Gombas, Peter
          Schvarcz, Tibor
          Mihaly, Orsolya
          Kapin, Marianna
          Zub, Alexandra
          Kuthi, Levente
          Tiszlavicz, Laszlo
          Glasz, Tibor
          Frost, Shaun
        affil: https://ror.org/04ywhbc61 Australian e-Health Research Centre, CSIRO, Kensington, Australia
      sug:
        subj:
          Prostatic Neoplasms Pathology
          Prostatic Neoplasms Diagnosis
          Convolutional Neural Networks Methods
          Diagnosis, Computer Assisted Methods
          Image Interpretation, Computer Assisted
          Image Processing, Computer Assisted
          Human
          Male
          Artificial Intelligence
          Deep Learning
          Machine Learning
          Algorithms
          Sensitivity and Specificity
          ROC Curve
          Descriptive Statistics
          Male
      ab: In recent years a significant demand to develop computer-assisted diagnostic tools to assess prostate cancer using whole slide images has been observed. In this study we develop and validate a machine learning system for cancer assessment, inclusive of detection of perineural invasion and measurement of cancer portion to meet clinical reporting needs. The system analyses the whole slide image in three consecutive stages: tissue detection, classification, and slide level analysis. The whole slide image is divided into smaller regions (patches). The tissue detection stage relies upon traditional machine learning to identify WSI patches containing tissue, which are then further assessed at the classification stage where deep learning algorithms are employed to detect and classify cancer tissue. At the slide level analysis stage, entire slide level information is generated by aggregating all the patch level information of the slide. A total of 2340 haematoxylin and eosin stained slides were used to train and validate the system. A medical team consisting of 11 board certified pathologists with prostatic pathology subspeciality competences working independently in 4 different medical centres performed the annotations. Pixel-level annotation based on an agreed set of 10 annotation terms, determined based on medical relevance and prevalence, was created by the team. The system achieved an accuracy of 99.53% in tissue detection, with sensitivity and specificity respectively of 99.78% and 99.12%. The system achieved an accuracy of 92.80% in classifying tissue terms, with sensitivity and specificity respectively 92.61% and 99.25%, when 5x magnification level was used. For 10x magnification, these values were respectively 91.04%, 90.49%, and 99.07%. For 20x magnification they were 84.71%, 83.95%, 90.13%.
      pubtype: Academic Journal
      doctype:
        equations & formulas
        pictorial
        research
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        Journal Article
      ougenre: Article
    language: English
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